Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AP005117.1-202ENST00000581724 1908 ntBASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 LRRC59-203ENST00000576448 1531 ntBASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 AC105250.1-201ENST00000509378 2057 ntBASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 KRT8P14-201ENST00000414254 1442 ntBASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
SHROOM1Q2M3G4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 AL023775.1-201ENST00000454907 1746 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 POM121L8P-201ENST00000417732 1281 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 MTX1P1-201ENST00000440904 838 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 AC245100.3-201ENST00000441281 285 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 POM121L9P-203ENST00000441984 1285 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 RN7SL48P-201ENST00000579283 293 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 ENPP7P14-201ENST00000621765 1040 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 AL008638.5-201ENST00000623814 1298 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 DOC2GP-204ENST00000639052 2548 ntBASIC17.96■□□□□ 0.47
SHROOM1Q2M3G4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHROOM1Q2M3G4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHROOM1Q2M3G4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.96■□□□□ 0.46
SHROOM1Q2M3G4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.96■□□□□ 0.46
SHROOM1Q2M3G4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 OR6D1P-202ENST00000641007 5290 ntBASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 TPM3P8-201ENST00000330554 643 ntBASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 AC004066.1-201ENST00000502488 802 ntBASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 SAMD11P1-201ENST00000571429 661 ntBASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHROOM1Q2M3G4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHROOM1Q2M3G4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms