Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.42■□□□□ 0.54
PDS5AQ29RF7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 GOLGA2P4-201ENST00000441462 777 ntBASIC18.42■□□□□ 0.54
PDS5AQ29RF7 Z93015.1-201ENST00000451718 390 ntBASIC18.42■□□□□ 0.54
PDS5AQ29RF7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 MIR4538-201ENST00000581377 78 ntBASIC18.42■□□□□ 0.54
PDS5AQ29RF7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 AC092850.2-201ENST00000623821 2697 ntBASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AC108725.1-201ENST00000495472 409 ntBASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AP003171.2-201ENST00000528208 925 ntBASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AL354989.2-201ENST00000435838 1540 ntBASIC18.41■□□□□ 0.54
PDS5AQ29RF7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 AC055811.4-201ENST00000624039 1754 ntBASIC18.41■□□□□ 0.54
PDS5AQ29RF7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 CICP6-201ENST00000457191 2729 ntBASIC18.41■□□□□ 0.54
PDS5AQ29RF7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PDS5AQ29RF7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 AC007950.2-201ENST00000615045 2347 ntBASIC18.4■□□□□ 0.54
PDS5AQ29RF7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.4■□□□□ 0.54
PDS5AQ29RF7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 BRWD1P1-201ENST00000401091 371 ntBASIC18.4■□□□□ 0.54
PDS5AQ29RF7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 PFN1P12-201ENST00000455938 534 ntBASIC18.4■□□□□ 0.54
PDS5AQ29RF7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 MESTP3-201ENST00000503460 968 ntBASIC18.4■□□□□ 0.54
PDS5AQ29RF7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 AC106820.3-201ENST00000561653 397 ntBASIC18.4■□□□□ 0.54
PDS5AQ29RF7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms