Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B3Q16720 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B3Q16720 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 MIR1909-201ENST00000411312 80 ntBASIC19.02■□□□□ 0.64
ATP2B3Q16720 KRT43P-201ENST00000434019 910 ntBASIC19.02■□□□□ 0.64
ATP2B3Q16720 BCRP2-202ENST00000447763 634 ntBASIC19.02■□□□□ 0.64
ATP2B3Q16720 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B3Q16720 BCRP6-201ENST00000510112 632 ntBASIC19.02■□□□□ 0.64
ATP2B3Q16720 BCRP7-201ENST00000511549 544 ntBASIC19.02■□□□□ 0.64
ATP2B3Q16720 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B3Q16720 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.02■□□□□ 0.64
ATP2B3Q16720 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B3Q16720 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B3Q16720 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B3Q16720 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.02■□□□□ 0.63
ATP2B3Q16720 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2B3Q16720 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2B3Q16720 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2B3Q16720 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 MIR658-201ENST00000385210 100 ntBASIC19.01■□□□□ 0.63
ATP2B3Q16720 BAATP1-201ENST00000412284 1225 ntBASIC19.01■□□□□ 0.63
ATP2B3Q16720 AC012441.1-201ENST00000446669 685 ntBASIC19.01■□□□□ 0.63
ATP2B3Q16720 AC022210.1-201ENST00000449856 793 ntBASIC19.01■□□□□ 0.63
ATP2B3Q16720 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 SNX29P1-201ENST00000548357 1007 ntBASIC19.01■□□□□ 0.63
ATP2B3Q16720 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2B3Q16720 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B3Q16720 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B3Q16720 AC005229.1-201ENST00000392885 409 ntBASIC19■□□□□ 0.63
ATP2B3Q16720 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19■□□□□ 0.63
ATP2B3Q16720 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP2B3Q16720 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B3Q16720 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B3Q16720 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19■□□□□ 0.63
ATP2B3Q16720 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19■□□□□ 0.63
ATP2B3Q16720 AL022328.1-201ENST00000610050 478 ntBASIC19■□□□□ 0.63
ATP2B3Q16720 MIR6805-201ENST00000615055 62 ntBASIC19■□□□□ 0.63
ATP2B3Q16720 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19■□□□□ 0.63
ATP2B3Q16720 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B3Q16720 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19■□□□□ 0.63
ATP2B3Q16720 TCAF2P1-201ENST00000291129 2421 ntBASIC19■□□□□ 0.63
ATP2B3Q16720 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATP2B3Q16720 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP2B3Q16720 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B3Q16720 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B3Q16720 AC134312.5-201ENST00000568031 1313 ntBASIC19■□□□□ 0.63
ATP2B3Q16720 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms