Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
IRX4P78413 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX4P78413 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.29■□□□□ 0.2
IRX4P78413 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
IRX4P78413 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX4P78413 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX4P78413 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
IRX4P78413 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
IRX4P78413 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.28■□□□□ 0.2
IRX4P78413 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
IRX4P78413 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.28■□□□□ 0.2
IRX4P78413 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
IRX4P78413 RAB43P1-201ENST00000561790 589 ntBASIC16.28■□□□□ 0.2
IRX4P78413 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX4P78413 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX4P78413 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX4P78413 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX4P78413 BTBD7P1-201ENST00000447253 1453 ntBASIC16.28■□□□□ 0.2
IRX4P78413 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX4P78413 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX4P78413 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
IRX4P78413 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX4P78413 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
IRX4P78413 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX4P78413 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX4P78413 AC245100.3-201ENST00000441281 285 ntBASIC16.27■□□□□ 0.2
IRX4P78413 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 DOC2GP-202ENST00000514950 1163 ntBASIC16.27■□□□□ 0.2
IRX4P78413 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.27■□□□□ 0.2
IRX4P78413 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 BANF1P1-201ENST00000553684 263 ntBASIC16.27■□□□□ 0.2
IRX4P78413 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.27■□□□□ 0.2
IRX4P78413 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.27■□□□□ 0.2
IRX4P78413 AL079307.3-201ENST00000556114 283 ntBASIC16.27■□□□□ 0.2
IRX4P78413 AC106886.1-201ENST00000568660 600 ntBASIC16.27■□□□□ 0.2
IRX4P78413 AL133215.2-201ENST00000609242 977 ntBASIC16.27■□□□□ 0.2
IRX4P78413 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
IRX4P78413 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.27■□□□□ 0.2
IRX4P78413 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IRX4P78413 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IRX4P78413 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
IRX4P78413 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
IRX4P78413 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IRX4P78413 PCDHA3-202ENST00000532566 4594 ntBASIC16.27■□□□□ 0.19
IRX4P78413 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.27■□□□□ 0.19
IRX4P78413 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
IRX4P78413 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
IRX4P78413 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IRX4P78413 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
IRX4P78413 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX4P78413 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
IRX4P78413 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.26■□□□□ 0.19
IRX4P78413 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.26■□□□□ 0.19
IRX4P78413 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IRX4P78413 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IRX4P78413 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IRX4P78413 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IRX4P78413 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms