Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.56□□□□□ -0.08
CDH12P55289 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.56□□□□□ -0.08
CDH12P55289 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 AJ011931.1-201ENST00000618749 2492 ntBASIC14.56□□□□□ -0.08
CDH12P55289 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 KRT8P37-201ENST00000451609 1420 ntBASIC14.56□□□□□ -0.08
CDH12P55289 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH12P55289 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH12P55289 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH12P55289 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 AC007191.1-201ENST00000623179 2995 ntBASIC14.55□□□□□ -0.08
CDH12P55289 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH12P55289 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CDH12P55289 ELL2P1-201ENST00000413990 1906 ntBASIC14.55□□□□□ -0.08
CDH12P55289 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH12P55289 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH12P55289 PHKG1P2-201ENST00000457537 863 ntBASIC14.55□□□□□ -0.08
CDH12P55289 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH12P55289 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CDH12P55289 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.55□□□□□ -0.08
CDH12P55289 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH12P55289 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH12P55289 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.55□□□□□ -0.08
CDH12P55289 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDH12P55289 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH12P55289 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
CDH12P55289 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH12P55289 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH12P55289 AC139749.1-202ENST00000617529 3139 ntBASIC14.55□□□□□ -0.08
CDH12P55289 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH12P55289 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH12P55289 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH12P55289 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH12P55289 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms