Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 AC068587.3-201ENST00000526613 355 ntBASIC11.39□□□□□ -0.59
APOC4P55056 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.39□□□□□ -0.59
APOC4P55056 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.39□□□□□ -0.59
APOC4P55056 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.39□□□□□ -0.59
APOC4P55056 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.39□□□□□ -0.59
APOC4P55056 BTNL10-201ENST00000595971 695 ntBASIC11.39□□□□□ -0.59
APOC4P55056 AC008735.3-201ENST00000596646 500 ntBASIC11.39□□□□□ -0.59
APOC4P55056 AC107373.2-201ENST00000607735 490 ntBASIC11.39□□□□□ -0.59
APOC4P55056 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 AL603832.2-201ENST00000566195 2125 ntBASIC11.39□□□□□ -0.59
APOC4P55056 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.39□□□□□ -0.59
APOC4P55056 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
APOC4P55056 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 U91328.1-201ENST00000437528 223 ntBASIC11.38□□□□□ -0.59
APOC4P55056 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 MIR5189-201ENST00000577370 114 ntBASIC11.38□□□□□ -0.59
APOC4P55056 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.38□□□□□ -0.59
APOC4P55056 MIR6752-201ENST00000618442 71 ntBASIC11.38□□□□□ -0.59
APOC4P55056 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.38□□□□□ -0.59
APOC4P55056 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 AC024909.3-201ENST00000611513 2257 ntBASIC11.38□□□□□ -0.59
APOC4P55056 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.38□□□□□ -0.59
APOC4P55056 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOC4P55056 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms