Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC8P31273 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
HOXC8P31273 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC8P31273 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC8P31273 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.67■□□□□ 0.26
HOXC8P31273 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC8P31273 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC8P31273 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC8P31273 AC005324.6-201ENST00000587972 613 ntBASIC16.67■□□□□ 0.26
HOXC8P31273 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HOXC8P31273 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
HOXC8P31273 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.67■□□□□ 0.26
HOXC8P31273 AL162426.1-201ENST00000624141 743 ntBASIC16.67■□□□□ 0.26
HOXC8P31273 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC8P31273 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HOXC8P31273 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HOXC8P31273 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC8P31273 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC8P31273 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC8P31273 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC8P31273 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
HOXC8P31273 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC8P31273 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HOXC8P31273 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC8P31273 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HOXC8P31273 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC8P31273 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HOXC8P31273 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC8P31273 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXC8P31273 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXC8P31273 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 AC010141.1-201ENST00000411585 623 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 CYP46A4P-201ENST00000414953 267 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC8P31273 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 SPTLC1P5-201ENST00000450718 252 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 EIF4HP1-201ENST00000453115 687 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC8P31273 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXC8P31273 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXC8P31273 AC015967.2-201ENST00000624092 234 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 AC006435.4-201ENST00000625037 234 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 AL356737.1-201ENST00000634391 234 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC8P31273 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 KRT8P19-201ENST00000551916 1455 ntBASIC16.66■□□□□ 0.26
HOXC8P31273 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC8P31273 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HOXC8P31273 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXC8P31273 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 AL137783.1-201ENST00000623494 1896 ntBASIC16.65■□□□□ 0.26
HOXC8P31273 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC8P31273 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC8P31273 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 RN7SKP230-201ENST00000365642 335 ntBASIC16.65■□□□□ 0.26
HOXC8P31273 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.65■□□□□ 0.26
HOXC8P31273 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC8P31273 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HOXC8P31273 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HOXC8P31273 AC092506.1-202ENST00000401022 528 ntBASIC16.65■□□□□ 0.26
HOXC8P31273 AL008707.1-201ENST00000422498 534 ntBASIC16.65■□□□□ 0.26
HOXC8P31273 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC8P31273 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.65■□□□□ 0.26
HOXC8P31273 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC8P31273 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC8P31273 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HOXC8P31273 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC8P31273 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC8P31273 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.65■□□□□ 0.26
HOXC8P31273 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms