Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
KCNA3P22001 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 SHC1P1-201ENST00000425230 1745 ntBASIC18.71■□□□□ 0.59
KCNA3P22001 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 INE2-201ENST00000630399 1874 ntBASIC18.71■□□□□ 0.59
KCNA3P22001 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.71■□□□□ 0.59
KCNA3P22001 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 FAM90A7P-201ENST00000382628 1395 ntBASIC18.71■□□□□ 0.59
KCNA3P22001 FAM90A23P-201ENST00000400136 1395 ntBASIC18.71■□□□□ 0.59
KCNA3P22001 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
KCNA3P22001 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KCNA3P22001 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.71■□□□□ 0.59
KCNA3P22001 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.71■□□□□ 0.59
KCNA3P22001 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 RN7SL258P-201ENST00000478664 300 ntBASIC18.71■□□□□ 0.59
KCNA3P22001 RN7SL67P-201ENST00000492147 296 ntBASIC18.71■□□□□ 0.59
KCNA3P22001 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.71■□□□□ 0.59
KCNA3P22001 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNA3P22001 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.71■□□□□ 0.59
KCNA3P22001 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.71■□□□□ 0.59
KCNA3P22001 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
KCNA3P22001 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.71■□□□□ 0.59
KCNA3P22001 RPL17P45-201ENST00000586289 509 ntBASIC18.71■□□□□ 0.59
KCNA3P22001 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.71■□□□□ 0.59
KCNA3P22001 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.71■□□□□ 0.59
KCNA3P22001 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
KCNA3P22001 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
KCNA3P22001 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KCNA3P22001 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KCNA3P22001 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
KCNA3P22001 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.71■□□□□ 0.58
KCNA3P22001 AC009093.2-202ENST00000620513 2079 ntBASIC18.7■□□□□ 0.58
KCNA3P22001 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNA3P22001 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KCNA3P22001 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KCNA3P22001 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNA3P22001 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNA3P22001 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.7■□□□□ 0.58
KCNA3P22001 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KCNA3P22001 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNA3P22001 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNA3P22001 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.7■□□□□ 0.58
KCNA3P22001 POU5F1P2-201ENST00000521750 823 ntBASIC18.7■□□□□ 0.58
KCNA3P22001 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.7■□□□□ 0.58
KCNA3P22001 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNA3P22001 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.7■□□□□ 0.58
KCNA3P22001 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.7■□□□□ 0.58
KCNA3P22001 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.7■□□□□ 0.58
KCNA3P22001 AL645728.2-202ENST00000641679 227 ntBASIC18.7■□□□□ 0.58
KCNA3P22001 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.7■□□□□ 0.58
KCNA3P22001 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
KCNA3P22001 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.7■□□□□ 0.58
KCNA3P22001 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KCNA3P22001 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KCNA3P22001 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA3P22001 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KCNA3P22001 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA3P22001 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA3P22001 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA3P22001 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA3P22001 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
KCNA3P22001 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KCNA3P22001 AC239868.1-201ENST00000369385 493 ntBASIC18.69■□□□□ 0.58
KCNA3P22001 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.69■□□□□ 0.58
KCNA3P22001 AC130709.1-201ENST00000484779 1212 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms