Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.38■□□□□ 0.05
CAPN1P07384 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.38■□□□□ 0.05
CAPN1P07384 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CAPN1P07384 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CAPN1P07384 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.38■□□□□ 0.05
CAPN1P07384 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.38■□□□□ 0.05
CAPN1P07384 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 MTND6P24-201ENST00000440466 518 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CAPN1P07384 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.38■□□□□ 0.05
CAPN1P07384 AC009407.1-201ENST00000568958 598 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.38■□□□□ 0.05
CAPN1P07384 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 AC026979.3-201ENST00000607315 403 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 AL589739.1-201ENST00000607720 493 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 AL844908.2-201ENST00000609461 460 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.38■□□□□ 0.05
CAPN1P07384 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CAPN1P07384 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 AC087499.5-201ENST00000452760 1342 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.38■□□□□ 0.05
CAPN1P07384 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 CETN4P-206ENST00000642099 2168 ntBASIC15.38■□□□□ 0.05
CAPN1P07384 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CAPN1P07384 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CAPN1P07384 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CAPN1P07384 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.37■□□□□ 0.05
CAPN1P07384 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CAPN1P07384 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 PHKG1P2-201ENST00000457537 863 ntBASIC15.37■□□□□ 0.05
CAPN1P07384 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.37■□□□□ 0.05
CAPN1P07384 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.37■□□□□ 0.05
CAPN1P07384 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
CAPN1P07384 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.37■□□□□ 0.05
CAPN1P07384 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CAPN1P07384 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CAPN1P07384 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms