Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.97■□□□□ 0.79
COL5A2P05997 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.97■□□□□ 0.79
COL5A2P05997 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.97■□□□□ 0.79
COL5A2P05997 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.97■□□□□ 0.79
COL5A2P05997 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.97■□□□□ 0.79
COL5A2P05997 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL5A2P05997 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.97■□□□□ 0.79
COL5A2P05997 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.97■□□□□ 0.79
COL5A2P05997 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL5A2P05997 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.97■□□□□ 0.79
COL5A2P05997 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.97■□□□□ 0.79
COL5A2P05997 SCARNA21-201ENST00000517026 139 ntBASIC19.97■□□□□ 0.79
COL5A2P05997 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.97■□□□□ 0.79
COL5A2P05997 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL5A2P05997 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.97■□□□□ 0.79
COL5A2P05997 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.97■□□□□ 0.79
COL5A2P05997 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL5A2P05997 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL5A2P05997 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.96■□□□□ 0.79
COL5A2P05997 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 AL138725.1-201ENST00000407347 1314 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 AC074138.1-201ENST00000611182 1303 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.96■□□□□ 0.79
COL5A2P05997 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL5A2P05997 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.96■□□□□ 0.79
COL5A2P05997 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 AC012441.2-201ENST00000444843 739 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 RN7SL258P-201ENST00000478664 300 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 NDUFS6P1-201ENST00000485187 316 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.96■□□□□ 0.79
COL5A2P05997 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.96■□□□□ 0.79
COL5A2P05997 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC19.96■□□□□ 0.79
COL5A2P05997 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.96■□□□□ 0.79
COL5A2P05997 AL109837.1-201ENST00000603272 613 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL5A2P05997 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 AC006058.4-201ENST00000624016 1670 ntBASIC19.96■□□□□ 0.79
COL5A2P05997 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.95■□□□□ 0.78
COL5A2P05997 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL5A2P05997 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.95■□□□□ 0.78
COL5A2P05997 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.95■□□□□ 0.78
COL5A2P05997 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.95■□□□□ 0.78
COL5A2P05997 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.95■□□□□ 0.78
COL5A2P05997 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.95■□□□□ 0.78
COL5A2P05997 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.95■□□□□ 0.78
COL5A2P05997 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.95■□□□□ 0.78
COL5A2P05997 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.95■□□□□ 0.78
COL5A2P05997 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.95■□□□□ 0.78
COL5A2P05997 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL5A2P05997 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.95■□□□□ 0.78
COL5A2P05997 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.95■□□□□ 0.78
COL5A2P05997 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL5A2P05997 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.95■□□□□ 0.78
COL5A2P05997 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL5A2P05997 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL5A2P05997 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
COL5A2P05997 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
COL5A2P05997 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.94■□□□□ 0.78
COL5A2P05997 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC19.94■□□□□ 0.78
COL5A2P05997 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.94■□□□□ 0.78
COL5A2P05997 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.94■□□□□ 0.78
COL5A2P05997 RN7SL818P-201ENST00000485099 259 ntBASIC19.94■□□□□ 0.78
COL5A2P05997 IGHV3-37-201ENST00000518544 340 ntBASIC19.94■□□□□ 0.78
COL5A2P05997 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.94■□□□□ 0.78
COL5A2P05997 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
COL5A2P05997 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.94■□□□□ 0.78
COL5A2P05997 RPL17P45-201ENST00000586289 509 ntBASIC19.94■□□□□ 0.78
COL5A2P05997 RN7SL725P-201ENST00000606439 259 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms