Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 AC008723.1-201ENST00000506922 207 ntBASIC9.39□□□□□ -0.91
APOBP04114 AC007952.4-201ENST00000573866 637 ntBASIC9.39□□□□□ -0.91
APOBP04114 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC9.39□□□□□ -0.91
APOBP04114 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
APOBP04114 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
APOBP04114 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 COX20P1-201ENST00000366529 357 ntBASIC9.39□□□□□ -0.91
APOBP04114 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 PFN2-205ENST00000461868 613 ntTSL 2 BASIC9.39□□□□□ -0.91
APOBP04114 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC9.39□□□□□ -0.91
APOBP04114 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC9.39□□□□□ -0.91
APOBP04114 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC9.39□□□□□ -0.91
APOBP04114 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
APOBP04114 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
APOBP04114 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
APOBP04114 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
APOBP04114 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
APOBP04114 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC9.38□□□□□ -0.91
APOBP04114 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 RPS5-204ENST00000598098 536 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC9.38□□□□□ -0.91
APOBP04114 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC9.38□□□□□ -0.91
APOBP04114 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 AL645933.1-201ENST00000440087 609 ntBASIC9.38□□□□□ -0.91
APOBP04114 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 AL135901.1-201ENST00000451812 333 ntBASIC9.38□□□□□ -0.91
APOBP04114 BUD31-205ENST00000456893 512 ntTSL 5 BASIC9.38□□□□□ -0.91
APOBP04114 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
APOBP04114 MT3-203ENST00000565838 421 ntTSL 3 BASIC9.38□□□□□ -0.91
APOBP04114 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC9.38□□□□□ -0.91
APOBP04114 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 SIGLEC18P-201ENST00000602271 909 ntBASIC9.38□□□□□ -0.91
APOBP04114 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC9.38□□□□□ -0.91
APOBP04114 AC018629.1-201ENST00000623381 1736 ntBASIC9.38□□□□□ -0.91
APOBP04114 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
APOBP04114 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC9.38□□□□□ -0.91
APOBP04114 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC9.38□□□□□ -0.91
APOBP04114 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC9.38□□□□□ -0.91
APOBP04114 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC9.38□□□□□ -0.91
APOBP04114 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms