Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 KRT18P2-201ENST00000447938 1258 ntBASIC14.76□□□□□ -0.05
MT-ND1P03886 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.76□□□□□ -0.05
MT-ND1P03886 RPL13AP23-201ENST00000480739 586 ntBASIC14.76□□□□□ -0.05
MT-ND1P03886 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.76□□□□□ -0.05
MT-ND1P03886 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MT-ND1P03886 AC243562.2-201ENST00000561247 970 ntBASIC14.76□□□□□ -0.05
MT-ND1P03886 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.76□□□□□ -0.05
MT-ND1P03886 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.76□□□□□ -0.05
MT-ND1P03886 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MT-ND1P03886 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
MT-ND1P03886 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 AC007326.2-201ENST00000624224 7579 ntBASIC14.76□□□□□ -0.05
MT-ND1P03886 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.76□□□□□ -0.05
MT-ND1P03886 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.76□□□□□ -0.05
MT-ND1P03886 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MT-ND1P03886 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MT-ND1P03886 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.75□□□□□ -0.05
MT-ND1P03886 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.75□□□□□ -0.05
MT-ND1P03886 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.75□□□□□ -0.05
MT-ND1P03886 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.75□□□□□ -0.05
MT-ND1P03886 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
MT-ND1P03886 AC007967.2-201ENST00000432613 625 ntBASIC14.75□□□□□ -0.05
MT-ND1P03886 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.75□□□□□ -0.05
MT-ND1P03886 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.75□□□□□ -0.05
MT-ND1P03886 AC068137.2-201ENST00000605408 478 ntBASIC14.75□□□□□ -0.05
MT-ND1P03886 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
MT-ND1P03886 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.75□□□□□ -0.05
MT-ND1P03886 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.75□□□□□ -0.05
MT-ND1P03886 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MT-ND1P03886 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MT-ND1P03886 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.74□□□□□ -0.05
MT-ND1P03886 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 AC074386.1-202ENST00000463561 864 ntBASIC14.74□□□□□ -0.05
MT-ND1P03886 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.74□□□□□ -0.05
MT-ND1P03886 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MT-ND1P03886 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.74□□□□□ -0.05
MT-ND1P03886 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.74□□□□□ -0.05
MT-ND1P03886 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms