Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.39■□□□□ 0.37
GGPS1O95749 AC025279.2-201ENST00000569730 653 ntBASIC17.39■□□□□ 0.37
GGPS1O95749 RHOXF1P1-202ENST00000635473 501 ntBASIC17.39■□□□□ 0.37
GGPS1O95749 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GGPS1O95749 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.39■□□□□ 0.37
GGPS1O95749 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GGPS1O95749 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.39■□□□□ 0.37
GGPS1O95749 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GGPS1O95749 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.38■□□□□ 0.37
GGPS1O95749 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.38■□□□□ 0.37
GGPS1O95749 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 FAM21FP-201ENST00000426241 1131 ntBASIC17.38■□□□□ 0.37
GGPS1O95749 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GGPS1O95749 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.38■□□□□ 0.37
GGPS1O95749 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.38■□□□□ 0.37
GGPS1O95749 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GGPS1O95749 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.38■□□□□ 0.37
GGPS1O95749 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.38■□□□□ 0.37
GGPS1O95749 AC145423.3-201ENST00000615987 467 ntBASIC17.38■□□□□ 0.37
GGPS1O95749 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GGPS1O95749 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.38■□□□□ 0.37
GGPS1O95749 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
GGPS1O95749 KRT8P35-201ENST00000483942 1338 ntBASIC17.38■□□□□ 0.37
GGPS1O95749 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GGPS1O95749 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.37■□□□□ 0.37
GGPS1O95749 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.37■□□□□ 0.37
GGPS1O95749 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
GGPS1O95749 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GGPS1O95749 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.37■□□□□ 0.37
GGPS1O95749 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.37■□□□□ 0.37
GGPS1O95749 AC079316.1-201ENST00000548397 411 ntBASIC17.37■□□□□ 0.37
GGPS1O95749 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.37■□□□□ 0.37
GGPS1O95749 MIR4538-201ENST00000581377 78 ntBASIC17.37■□□□□ 0.37
GGPS1O95749 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.37■□□□□ 0.37
GGPS1O95749 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.37■□□□□ 0.37
GGPS1O95749 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 AC127383.1-201ENST00000444697 1800 ntBASIC17.37■□□□□ 0.37
GGPS1O95749 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GGPS1O95749 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GGPS1O95749 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GGPS1O95749 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.37■□□□□ 0.37
GGPS1O95749 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.36■□□□□ 0.37
GGPS1O95749 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.36■□□□□ 0.37
GGPS1O95749 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GGPS1O95749 AC132872.4-202ENST00000622924 2756 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.36■□□□□ 0.37
GGPS1O95749 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.36■□□□□ 0.37
GGPS1O95749 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GGPS1O95749 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms