Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.42■□□□□ 0.22
RTN3O95197 AC132938.2-201ENST00000579188 680 ntBASIC16.42■□□□□ 0.22
RTN3O95197 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.42■□□□□ 0.22
RTN3O95197 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.42■□□□□ 0.22
RTN3O95197 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
RTN3O95197 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.42■□□□□ 0.22
RTN3O95197 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.42■□□□□ 0.22
RTN3O95197 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.42■□□□□ 0.22
RTN3O95197 AL591163.1-201ENST00000641757 987 ntBASIC16.42■□□□□ 0.22
RTN3O95197 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 KRT8P22-201ENST00000562317 1415 ntBASIC16.42■□□□□ 0.22
RTN3O95197 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RTN3O95197 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RTN3O95197 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.41■□□□□ 0.22
RTN3O95197 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 AC138035.3-201ENST00000622706 2791 ntBASIC16.41■□□□□ 0.22
RTN3O95197 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RTN3O95197 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RTN3O95197 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN3O95197 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.41■□□□□ 0.22
RTN3O95197 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.41■□□□□ 0.22
RTN3O95197 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 ENPP7P5-201ENST00000541031 1031 ntBASIC16.41■□□□□ 0.22
RTN3O95197 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN3O95197 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN3O95197 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.41■□□□□ 0.22
RTN3O95197 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN3O95197 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RTN3O95197 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN3O95197 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.4■□□□□ 0.22
RTN3O95197 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.4■□□□□ 0.22
RTN3O95197 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.4■□□□□ 0.22
RTN3O95197 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RTN3O95197 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RTN3O95197 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RTN3O95197 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RTN3O95197 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 SOCS2P1-201ENST00000417727 557 ntBASIC16.4■□□□□ 0.22
RTN3O95197 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RTN3O95197 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.4■□□□□ 0.22
RTN3O95197 TTTY23B-201ENST00000442790 549 ntBASIC16.4■□□□□ 0.22
RTN3O95197 VDAC1P7-201ENST00000462417 847 ntBASIC16.4■□□□□ 0.22
RTN3O95197 AL359711.2-201ENST00000563105 872 ntBASIC16.4■□□□□ 0.22
RTN3O95197 AC120045.2-201ENST00000567334 178 ntBASIC16.4■□□□□ 0.22
RTN3O95197 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.4■□□□□ 0.22
RTN3O95197 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN3O95197 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 271.7 ms