Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST1O76090 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
BEST1O76090 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
BEST1O76090 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST1O76090 BAATP1-201ENST00000412284 1225 ntBASIC16.23■□□□□ 0.19
BEST1O76090 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST1O76090 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
BEST1O76090 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST1O76090 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST1O76090 AC068587.3-201ENST00000526613 355 ntBASIC16.23■□□□□ 0.19
BEST1O76090 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 HILS1-202ENST00000545329 423 ntBASIC16.23■□□□□ 0.19
BEST1O76090 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST1O76090 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST1O76090 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.23■□□□□ 0.19
BEST1O76090 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 AL162274.1-201ENST00000617191 1098 ntBASIC16.23■□□□□ 0.19
BEST1O76090 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 BX539320.1-201ENST00000623759 877 ntBASIC16.23■□□□□ 0.19
BEST1O76090 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.23■□□□□ 0.19
BEST1O76090 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
BEST1O76090 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.23■□□□□ 0.19
BEST1O76090 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 AC134312.5-201ENST00000568031 1313 ntBASIC16.22■□□□□ 0.19
BEST1O76090 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.22■□□□□ 0.19
BEST1O76090 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.22■□□□□ 0.19
BEST1O76090 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 RNU1-114P-201ENST00000365297 166 ntBASIC16.22■□□□□ 0.19
BEST1O76090 ACKR1-201ENST00000368121 1240 ntBASIC16.22■□□□□ 0.19
BEST1O76090 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
BEST1O76090 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
BEST1O76090 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.22■□□□□ 0.19
BEST1O76090 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 AC012441.1-201ENST00000446669 685 ntBASIC16.22■□□□□ 0.19
BEST1O76090 BCRP2-202ENST00000447763 634 ntBASIC16.22■□□□□ 0.19
BEST1O76090 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.22■□□□□ 0.19
BEST1O76090 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.22■□□□□ 0.19
BEST1O76090 AC022137.2-201ENST00000503482 481 ntBASIC16.22■□□□□ 0.19
BEST1O76090 AC106760.1-201ENST00000508690 800 ntBASIC16.22■□□□□ 0.19
BEST1O76090 BCRP6-201ENST00000510112 632 ntBASIC16.22■□□□□ 0.19
BEST1O76090 BCRP7-201ENST00000511549 544 ntBASIC16.22■□□□□ 0.19
BEST1O76090 KRT17P8-201ENST00000540749 863 ntBASIC16.22■□□□□ 0.19
BEST1O76090 PTP4A1P2-201ENST00000546033 454 ntBASIC16.22■□□□□ 0.19
BEST1O76090 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 SAMD11P1-201ENST00000571429 661 ntBASIC16.22■□□□□ 0.19
BEST1O76090 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.22■□□□□ 0.19
BEST1O76090 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.22■□□□□ 0.19
BEST1O76090 AC233724.13-201ENST00000598383 410 ntBASIC16.22■□□□□ 0.19
BEST1O76090 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
BEST1O76090 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.22■□□□□ 0.19
BEST1O76090 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
BEST1O76090 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms