Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LDB3O75112 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
LDB3O75112 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.64□□□□□ -0.07
LDB3O75112 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LDB3O75112 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 FAM86LP-201ENST00000478302 853 ntBASIC14.63□□□□□ -0.07
LDB3O75112 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.63□□□□□ -0.07
LDB3O75112 API5-211ENST00000534695 560 ntTSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 AC190387.1-201ENST00000551683 408 ntBASIC14.63□□□□□ -0.07
LDB3O75112 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 AC000095.1-201ENST00000603208 874 ntBASIC14.63□□□□□ -0.07
LDB3O75112 MIR8072-201ENST00000614241 80 ntBASIC14.63□□□□□ -0.07
LDB3O75112 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LDB3O75112 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LDB3O75112 AC104640.1-201ENST00000562617 2109 ntBASIC14.63□□□□□ -0.07
LDB3O75112 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.63□□□□□ -0.07
LDB3O75112 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LDB3O75112 AC138035.3-201ENST00000622706 2791 ntBASIC14.62□□□□□ -0.07
LDB3O75112 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LDB3O75112 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LDB3O75112 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.62□□□□□ -0.07
LDB3O75112 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LDB3O75112 CICP11-201ENST00000434745 2827 ntBASIC14.62□□□□□ -0.07
LDB3O75112 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LDB3O75112 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.62□□□□□ -0.07
LDB3O75112 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LDB3O75112 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.62□□□□□ -0.07
LDB3O75112 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.62□□□□□ -0.07
LDB3O75112 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LDB3O75112 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.62□□□□□ -0.07
LDB3O75112 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.62□□□□□ -0.07
LDB3O75112 AL353779.1-201ENST00000434793 351 ntBASIC14.62□□□□□ -0.07
LDB3O75112 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.62□□□□□ -0.07
LDB3O75112 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.62□□□□□ -0.07
LDB3O75112 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.62□□□□□ -0.07
LDB3O75112 AC123567.1-201ENST00000548294 1261 ntBASIC14.62□□□□□ -0.07
LDB3O75112 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
LDB3O75112 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.62□□□□□ -0.07
LDB3O75112 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
LDB3O75112 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 DBET-201ENST00000630918 3363 ntBASIC14.62□□□□□ -0.07
LDB3O75112 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.62□□□□□ -0.07
LDB3O75112 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.62□□□□□ -0.07
LDB3O75112 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LDB3O75112 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms