Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 KRT16P1-201ENST00000399124 1418 ntBASIC13.87□□□□□ -0.19
PFDN1O60925 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 GPAA1P2-202ENST00000606848 1787 ntBASIC13.86□□□□□ -0.19
PFDN1O60925 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 FAM90A12P-201ENST00000519497 2375 ntBASIC13.86□□□□□ -0.19
PFDN1O60925 FAM90A24P-201ENST00000520792 2369 ntBASIC13.86□□□□□ -0.19
PFDN1O60925 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 RPS2P4-201ENST00000476944 856 ntBASIC13.86□□□□□ -0.19
PFDN1O60925 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PFDN1O60925 AP002761.4-201ENST00000565433 3361 ntBASIC13.86□□□□□ -0.19
PFDN1O60925 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 SNX33P1-201ENST00000592116 1762 ntBASIC13.86□□□□□ -0.19
PFDN1O60925 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.86□□□□□ -0.19
PFDN1O60925 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 AC015819.3-201ENST00000624305 2674 ntBASIC13.86□□□□□ -0.19
PFDN1O60925 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PFDN1O60925 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.86□□□□□ -0.19
PFDN1O60925 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PFDN1O60925 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PFDN1O60925 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PFDN1O60925 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC13.85□□□□□ -0.19
PFDN1O60925 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
PFDN1O60925 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PFDN1O60925 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PFDN1O60925 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
PFDN1O60925 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.85□□□□□ -0.19
PFDN1O60925 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.85□□□□□ -0.19
PFDN1O60925 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PFDN1O60925 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms