Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
OPHN1O60890 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.32■□□□□ 0.2
OPHN1O60890 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
OPHN1O60890 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
OPHN1O60890 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
OPHN1O60890 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
OPHN1O60890 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
OPHN1O60890 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
OPHN1O60890 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 SSR4P1-203ENST00000599569 2260 ntBASIC16.31■□□□□ 0.2
OPHN1O60890 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 TMBIM7P-203ENST00000641617 1718 ntBASIC16.31■□□□□ 0.2
OPHN1O60890 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 KRT8P37-201ENST00000451609 1420 ntBASIC16.31■□□□□ 0.2
OPHN1O60890 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
OPHN1O60890 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.31■□□□□ 0.2
OPHN1O60890 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 AC009477.1-201ENST00000452936 217 ntBASIC16.31■□□□□ 0.2
OPHN1O60890 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.31■□□□□ 0.2
OPHN1O60890 AC022494.1-201ENST00000466044 728 ntBASIC16.31■□□□□ 0.2
OPHN1O60890 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.31■□□□□ 0.2
OPHN1O60890 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.31■□□□□ 0.2
OPHN1O60890 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
OPHN1O60890 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
OPHN1O60890 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.31■□□□□ 0.2
OPHN1O60890 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 AC018892.3-201ENST00000623986 2499 ntBASIC16.3■□□□□ 0.2
OPHN1O60890 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.3■□□□□ 0.2
OPHN1O60890 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.3■□□□□ 0.2
OPHN1O60890 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 AC087499.5-201ENST00000452760 1342 ntBASIC16.3■□□□□ 0.2
OPHN1O60890 AC073347.1-201ENST00000421633 2643 ntBASIC16.3■□□□□ 0.2
OPHN1O60890 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
OPHN1O60890 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.3■□□□□ 0.2
OPHN1O60890 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 GIMAP3P-201ENST00000495150 836 ntBASIC16.3■□□□□ 0.2
OPHN1O60890 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 HILS1-202ENST00000545329 423 ntBASIC16.3■□□□□ 0.2
OPHN1O60890 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
OPHN1O60890 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.3■□□□□ 0.2
OPHN1O60890 AC017083.2-201ENST00000608069 979 ntBASIC16.3■□□□□ 0.2
OPHN1O60890 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.3■□□□□ 0.2
OPHN1O60890 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.3■□□□□ 0.2
OPHN1O60890 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
OPHN1O60890 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms