Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.82■□□□□ 0.28
EXTL3O43909 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.82■□□□□ 0.28
EXTL3O43909 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.82■□□□□ 0.28
EXTL3O43909 AC133539.2-201ENST00000604757 467 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.82■□□□□ 0.28
EXTL3O43909 WFDC1-204ENST00000613603 549 ntBASIC16.82■□□□□ 0.28
EXTL3O43909 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.82■□□□□ 0.28
EXTL3O43909 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.82■□□□□ 0.28
EXTL3O43909 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
EXTL3O43909 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
EXTL3O43909 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.82■□□□□ 0.28
EXTL3O43909 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EXTL3O43909 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.82■□□□□ 0.28
EXTL3O43909 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EXTL3O43909 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.81■□□□□ 0.28
EXTL3O43909 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.81■□□□□ 0.28
EXTL3O43909 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
EXTL3O43909 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 FER1L4-210ENST00000615531 5998 ntBASIC16.81■□□□□ 0.28
EXTL3O43909 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.81■□□□□ 0.28
EXTL3O43909 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
EXTL3O43909 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 AC104457.1-201ENST00000401024 814 ntBASIC16.81■□□□□ 0.28
EXTL3O43909 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.81■□□□□ 0.28
EXTL3O43909 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.81■□□□□ 0.28
EXTL3O43909 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.81■□□□□ 0.28
EXTL3O43909 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.81■□□□□ 0.28
EXTL3O43909 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 AL138799.1-201ENST00000448213 1675 ntBASIC16.81■□□□□ 0.28
EXTL3O43909 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.81■□□□□ 0.28
EXTL3O43909 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EXTL3O43909 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EXTL3O43909 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EXTL3O43909 AC023024.2-201ENST00000623561 1993 ntBASIC16.8■□□□□ 0.28
EXTL3O43909 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.8■□□□□ 0.28
EXTL3O43909 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.8■□□□□ 0.28
EXTL3O43909 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
EXTL3O43909 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.8■□□□□ 0.28
EXTL3O43909 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EXTL3O43909 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EXTL3O43909 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.8■□□□□ 0.28
EXTL3O43909 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.8■□□□□ 0.28
EXTL3O43909 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.8■□□□□ 0.28
EXTL3O43909 KRT17P7-201ENST00000451704 1104 ntBASIC16.8■□□□□ 0.28
EXTL3O43909 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EXTL3O43909 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EXTL3O43909 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.8■□□□□ 0.28
EXTL3O43909 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms