Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC25.88■■□□□ 1.73
CUX2O14529 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CUX2O14529 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CUX2O14529 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CUX2O14529 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC25.87■■□□□ 1.73
CUX2O14529 RPL14-203ENST00000416518 812 ntTSL 3 BASIC25.87■■□□□ 1.73
CUX2O14529 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC25.87■■□□□ 1.73
CUX2O14529 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 DUTP3-201ENST00000450025 415 ntBASIC25.87■■□□□ 1.73
CUX2O14529 MIR4683-201ENST00000579659 81 ntBASIC25.87■■□□□ 1.73
CUX2O14529 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC25.87■■□□□ 1.73
CUX2O14529 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC25.87■■□□□ 1.73
CUX2O14529 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC25.87■■□□□ 1.73
CUX2O14529 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC25.87■■□□□ 1.73
CUX2O14529 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC25.87■■□□□ 1.73
CUX2O14529 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 CLUHP2-201ENST00000426660 1303 ntBASIC25.87■■□□□ 1.73
CUX2O14529 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CUX2O14529 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC25.87■■□□□ 1.73
CUX2O14529 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC25.87■■□□□ 1.73
CUX2O14529 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
CUX2O14529 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CUX2O14529 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC25.87■■□□□ 1.73
CUX2O14529 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CUX2O14529 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CUX2O14529 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 SURF4-203ENST00000371991 715 ntTSL 3 BASIC25.86■■□□□ 1.73
CUX2O14529 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CUX2O14529 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC25.86■■□□□ 1.73
CUX2O14529 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CUX2O14529 AC008805.1-201ENST00000590892 364 ntBASIC25.86■■□□□ 1.73
CUX2O14529 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC25.86■■□□□ 1.73
CUX2O14529 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CUX2O14529 AC106886.4-201ENST00000623557 2502 ntBASIC25.86■■□□□ 1.73
CUX2O14529 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.86■■□□□ 1.73
CUX2O14529 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
CUX2O14529 AC006449.6-201ENST00000612330 2296 ntBASIC25.86■■□□□ 1.73
CUX2O14529 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CUX2O14529 SHC1P1-201ENST00000425230 1745 ntBASIC25.86■■□□□ 1.73
CUX2O14529 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CUX2O14529 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CUX2O14529 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC25.86■■□□□ 1.73
CUX2O14529 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CUX2O14529 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CUX2O14529 AP000593.2-201ENST00000542775 1433 ntBASIC25.86■■□□□ 1.73
CUX2O14529 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 FTH1P22-201ENST00000456305 520 ntBASIC25.85■■□□□ 1.73
CUX2O14529 AC026470.1-201ENST00000478038 846 ntBASIC25.85■■□□□ 1.73
CUX2O14529 GDNF-207ENST00000515058 764 ntTSL 5 BASIC25.85■■□□□ 1.73
CUX2O14529 MIR4313-201ENST00000580760 101 ntBASIC25.85■■□□□ 1.73
CUX2O14529 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC25.85■■□□□ 1.73
CUX2O14529 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 SIGLEC18P-201ENST00000602271 909 ntBASIC25.85■■□□□ 1.73
CUX2O14529 LINC01783-202ENST00000614408 828 ntBASIC25.85■■□□□ 1.73
CUX2O14529 MIR6769A-201ENST00000617340 73 ntBASIC25.85■■□□□ 1.73
CUX2O14529 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CUX2O14529 BX284668.2-205ENST00000619677 828 ntBASIC25.85■■□□□ 1.73
CUX2O14529 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 WASH7P-201ENST00000488147 1351 ntBASIC25.85■■□□□ 1.73
CUX2O14529 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CUX2O14529 AL672207.1-201ENST00000328462 1570 ntBASIC25.85■■□□□ 1.73
CUX2O14529 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 KRT17P5-201ENST00000332088 839 ntBASIC25.85■■□□□ 1.73
CUX2O14529 NCR3-202ENST00000376071 541 ntTSL 5 BASIC25.85■■□□□ 1.73
CUX2O14529 CTBP2P6-201ENST00000526402 1229 ntBASIC25.85■■□□□ 1.73
CUX2O14529 AC142086.5-202ENST00000562500 217 ntBASIC25.85■■□□□ 1.73
CUX2O14529 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC25.85■■□□□ 1.73
CUX2O14529 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CUX2O14529 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC25.85■■□□□ 1.73
CUX2O14529 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC25.84■■□□□ 1.73
CUX2O14529 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CUX2O14529 AC026471.1-201ENST00000564629 3026 ntBASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms