Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC093827.2-201ENST00000512654 315 ntBASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MMP23A-201ENST00000234610 1017 ntBASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC023794.5-201ENST00000564380 2157 ntBASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AL512604.3-201ENST00000569583 964 ntBASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC005622.1-201ENST00000636801 1703 ntBASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AL022323.5-201ENST00000624101 2059 ntBASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC026992.2-203ENST00000563004 2419 ntBASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms