Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 AL691432.1-201ENST00000596308 1422 ntBASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 AL645939.2-201ENST00000427340 991 ntBASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 RNPS1P1-201ENST00000507437 918 ntBASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 PRELID1P1-202ENST00000567272 903 ntBASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
MEIS3P1A6NDR6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 HNRNPDP1-201ENST00000439535 754 ntBASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 AC109635.5-201ENST00000533593 962 ntBASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 AC117500.6-201ENST00000624871 588 ntBASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 AC107918.4-201ENST00000641966 3141 ntBASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.4□□□□□ -0.26
MEIS3P1A6NDR6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
MEIS3P1A6NDR6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
MEIS3P1A6NDR6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
MEIS3P1A6NDR6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 AC027601.5-201ENST00000624065 2482 ntBASIC13.39□□□□□ -0.27
MEIS3P1A6NDR6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms