Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AL157791.1-201ENST00000553667 1699 ntBASIC20.7■□□□□ 0.9
SBNO1A3KN83 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.7■□□□□ 0.9
SBNO1A3KN83 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.7■□□□□ 0.9
SBNO1A3KN83 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 HLA-K-203ENST00000430151 1046 ntBASIC20.7■□□□□ 0.9
SBNO1A3KN83 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.7■□□□□ 0.9
SBNO1A3KN83 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.7■□□□□ 0.9
SBNO1A3KN83 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.7■□□□□ 0.9
SBNO1A3KN83 AC242376.1-201ENST00000559033 726 ntBASIC20.7■□□□□ 0.9
SBNO1A3KN83 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.7■□□□□ 0.9
SBNO1A3KN83 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SBNO1A3KN83 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SBNO1A3KN83 AC055811.4-201ENST00000624039 1754 ntBASIC20.69■□□□□ 0.9
SBNO1A3KN83 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 AC026316.1-201ENST00000398900 414 ntBASIC20.69■□□□□ 0.9
SBNO1A3KN83 AC098935.1-201ENST00000446057 611 ntBASIC20.69■□□□□ 0.9
SBNO1A3KN83 RN7SL181P-201ENST00000462921 277 ntBASIC20.69■□□□□ 0.9
SBNO1A3KN83 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SBNO1A3KN83 MIR4754-201ENST00000582477 89 ntBASIC20.69■□□□□ 0.9
SBNO1A3KN83 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SBNO1A3KN83 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.68■□□□□ 0.9
SBNO1A3KN83 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.68■□□□□ 0.9
SBNO1A3KN83 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SBNO1A3KN83 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 RN7SKP175-201ENST00000408472 289 ntBASIC20.68■□□□□ 0.9
SBNO1A3KN83 MIR4683-201ENST00000579659 81 ntBASIC20.68■□□□□ 0.9
SBNO1A3KN83 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.68■□□□□ 0.9
SBNO1A3KN83 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.68■□□□□ 0.9
SBNO1A3KN83 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.68■□□□□ 0.9
SBNO1A3KN83 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SBNO1A3KN83 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.67■□□□□ 0.9
SBNO1A3KN83 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 AL132994.2-201ENST00000603120 687 ntBASIC20.67■□□□□ 0.9
SBNO1A3KN83 AL136295.7-201ENST00000619226 1200 ntBASIC20.67■□□□□ 0.9
SBNO1A3KN83 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms