Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 AC114501.2-201ENST00000439631 535 ntBASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 TARDBPP1-201ENST00000442013 1203 ntBASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 TIMM17BP1-201ENST00000545713 516 ntBASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 HNRNPUP1-201ENST00000554987 333 ntBASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 LINC01115-203ENST00000606068 577 ntBASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RPH3AQ9Y2J0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 AL607033.1-201ENST00000623900 1599 ntBASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 AL589987.1-201ENST00000453380 819 ntBASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 DOC2GP-202ENST00000514950 1163 ntBASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 AL606495.2-201ENST00000605867 535 ntBASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RPH3AQ9Y2J0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.35□□□□□ -0.11
RPH3AQ9Y2J0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms