Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.08■□□□□ 0.17
SCML2Q9UQR0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 MIR1909-201ENST00000411312 80 ntBASIC16.08■□□□□ 0.16
SCML2Q9UQR0 GHSR-202ENST00000427970 912 ntBASIC16.08■□□□□ 0.16
SCML2Q9UQR0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 AL359881.2-201ENST00000602973 570 ntBASIC16.08■□□□□ 0.16
SCML2Q9UQR0 MIR6805-201ENST00000615055 62 ntBASIC16.08■□□□□ 0.16
SCML2Q9UQR0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 KRT8P35-201ENST00000483942 1338 ntBASIC16.08■□□□□ 0.16
SCML2Q9UQR0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SCML2Q9UQR0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 ACTBP8-201ENST00000403258 1108 ntBASIC16.07■□□□□ 0.16
SCML2Q9UQR0 AL139094.1-201ENST00000405549 1188 ntBASIC16.07■□□□□ 0.16
SCML2Q9UQR0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 GNRHR2-203ENST00000581100 1187 ntBASIC16.07■□□□□ 0.16
SCML2Q9UQR0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.07■□□□□ 0.16
SCML2Q9UQR0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 PDIA3P1-201ENST00000471856 1510 ntBASIC16.07■□□□□ 0.16
SCML2Q9UQR0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.07■□□□□ 0.16
SCML2Q9UQR0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 CICP11-201ENST00000434745 2827 ntBASIC16.06■□□□□ 0.16
SCML2Q9UQR0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 SSR4P1-203ENST00000599569 2260 ntBASIC16.06■□□□□ 0.16
SCML2Q9UQR0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.06■□□□□ 0.16
SCML2Q9UQR0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms