Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.83■□□□□ 0.93
PHF8Q9UPP1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 PDIA3P2-201ENST00000428073 158 ntBASIC20.83■□□□□ 0.93
PHF8Q9UPP1 AC006335.1-201ENST00000445200 547 ntBASIC20.83■□□□□ 0.93
PHF8Q9UPP1 PUDPP3-201ENST00000445368 636 ntBASIC20.83■□□□□ 0.93
PHF8Q9UPP1 CEP164P1-201ENST00000455142 418 ntBASIC20.83■□□□□ 0.93
PHF8Q9UPP1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 AC017007.3-201ENST00000479865 435 ntBASIC20.83■□□□□ 0.93
PHF8Q9UPP1 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 AL160314.3-201ENST00000556041 767 ntBASIC20.83■□□□□ 0.93
PHF8Q9UPP1 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.83■□□□□ 0.93
PHF8Q9UPP1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 AC127383.1-201ENST00000444697 1800 ntBASIC20.83■□□□□ 0.92
PHF8Q9UPP1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
PHF8Q9UPP1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 RN7SKP175-201ENST00000408472 289 ntBASIC20.82■□□□□ 0.92
PHF8Q9UPP1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 AC104784.1-201ENST00000473096 294 ntBASIC20.82■□□□□ 0.92
PHF8Q9UPP1 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 REXO1L5P-201ENST00000622260 2098 ntBASIC20.82■□□□□ 0.92
PHF8Q9UPP1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHF8Q9UPP1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 AC116345.2-201ENST00000512837 523 ntBASIC20.81■□□□□ 0.92
PHF8Q9UPP1 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 AC100827.2-201ENST00000563214 1194 ntBASIC20.81■□□□□ 0.92
PHF8Q9UPP1 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHF8Q9UPP1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHF8Q9UPP1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PHF8Q9UPP1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PHF8Q9UPP1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHF8Q9UPP1 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms