Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CISHQ9NSE2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CISHQ9NSE2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CISHQ9NSE2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.57■□□□□ 0.24
CISHQ9NSE2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CISHQ9NSE2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CISHQ9NSE2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CISHQ9NSE2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 MST1L-201ENST00000442552 2185 ntBASIC16.56■□□□□ 0.24
CISHQ9NSE2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 GAPDHP40-201ENST00000505218 1006 ntBASIC16.56■□□□□ 0.24
CISHQ9NSE2 AC104596.2-201ENST00000512793 793 ntBASIC16.56■□□□□ 0.24
CISHQ9NSE2 AC138761.1-201ENST00000584393 385 ntBASIC16.56■□□□□ 0.24
CISHQ9NSE2 BRI3BPP1-201ENST00000594224 787 ntBASIC16.56■□□□□ 0.24
CISHQ9NSE2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 LINC00554-201ENST00000564841 3011 ntBASIC16.56■□□□□ 0.24
CISHQ9NSE2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.56■□□□□ 0.24
CISHQ9NSE2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CISHQ9NSE2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 DRD5P1-201ENST00000456605 1438 ntBASIC16.55■□□□□ 0.24
CISHQ9NSE2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 MYCLP2-201ENST00000449268 967 ntBASIC16.55■□□□□ 0.24
CISHQ9NSE2 VDAC1P7-201ENST00000462417 847 ntBASIC16.55■□□□□ 0.24
CISHQ9NSE2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 AC007431.3-201ENST00000623221 587 ntBASIC16.55■□□□□ 0.24
CISHQ9NSE2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 AC023157.3-201ENST00000619086 2088 ntBASIC16.55■□□□□ 0.24
CISHQ9NSE2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.55■□□□□ 0.24
CISHQ9NSE2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CISHQ9NSE2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CISHQ9NSE2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CISHQ9NSE2 AC026410.3-201ENST00000514280 936 ntBASIC16.54■□□□□ 0.24
CISHQ9NSE2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms