Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 MKNK2P1-201ENST00000437526 628 ntBASIC13.68□□□□□ -0.22
ELL3Q9HB65 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 AC105233.2-201ENST00000523697 349 ntBASIC13.68□□□□□ -0.22
ELL3Q9HB65 AF228730.5-201ENST00000530288 346 ntBASIC13.68□□□□□ -0.22
ELL3Q9HB65 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 AC055717.3-201ENST00000622967 595 ntBASIC13.68□□□□□ -0.22
ELL3Q9HB65 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 AC090616.6-203ENST00000579186 1945 ntBASIC13.68□□□□□ -0.22
ELL3Q9HB65 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 AC006486.2-201ENST00000624246 2199 ntBASIC13.68□□□□□ -0.22
ELL3Q9HB65 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.68□□□□□ -0.22
ELL3Q9HB65 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ELL3Q9HB65 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AC007686.3-201ENST00000619017 3487 ntBASIC13.67□□□□□ -0.22
ELL3Q9HB65 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AC105250.1-201ENST00000509378 2057 ntBASIC13.67□□□□□ -0.22
ELL3Q9HB65 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 MIR1233-2-201ENST00000408138 82 ntBASIC13.67□□□□□ -0.22
ELL3Q9HB65 MIR1233-1-201ENST00000408722 82 ntBASIC13.67□□□□□ -0.22
ELL3Q9HB65 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AC026120.1-201ENST00000611536 926 ntBASIC13.67□□□□□ -0.22
ELL3Q9HB65 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.67□□□□□ -0.22
ELL3Q9HB65 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.67□□□□□ -0.22
ELL3Q9HB65 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ELL3Q9HB65 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.66□□□□□ -0.22
ELL3Q9HB65 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ELL3Q9HB65 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ELL3Q9HB65 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ELL3Q9HB65 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms