Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 HYMAI-201ENST00000635591 3347 ntBASIC16.7■□□□□ 0.26
NXF3Q9H4D5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.7■□□□□ 0.26
NXF3Q9H4D5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AC090616.6-203ENST00000579186 1945 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 ACTBP8-201ENST00000403258 1108 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 CNN2P8-201ENST00000421872 913 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 FAM197Y7-201ENST00000432892 766 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AL590640.2-201ENST00000457038 527 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AC004066.1-201ENST00000502488 802 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AL583810.1-201ENST00000553344 1045 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 RHOXF1P1-202ENST00000635473 501 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AL158070.2-201ENST00000623713 1621 ntBASIC16.69■□□□□ 0.26
NXF3Q9H4D5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NXF3Q9H4D5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.68■□□□□ 0.26
NXF3Q9H4D5 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms