Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 MTND6P24-201ENST00000440466 518 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 FAM207CP-201ENST00000443486 507 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 TSPY16P-201ENST00000449843 468 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 RN7SL828P-201ENST00000607615 303 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 AL589739.1-201ENST00000607720 493 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 AC100757.3-201ENST00000622361 1406 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 PCDHA3-202ENST00000532566 4594 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 TMBIM7P-203ENST00000641617 1718 ntBASIC14.54□□□□□ -0.08
TM9SF2Q99805 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TM9SF2Q99805 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TM9SF2Q99805 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 TERF1P3-201ENST00000505638 1227 ntBASIC14.53□□□□□ -0.08
TM9SF2Q99805 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 AC105021.1-202ENST00000570572 669 ntBASIC14.53□□□□□ -0.08
TM9SF2Q99805 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 SPDYE12P-201ENST00000618416 771 ntBASIC14.53□□□□□ -0.08
TM9SF2Q99805 AL590560.3-201ENST00000623350 461 ntBASIC14.53□□□□□ -0.08
TM9SF2Q99805 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 AC023908.3-201ENST00000564211 3047 ntBASIC14.53□□□□□ -0.08
TM9SF2Q99805 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TM9SF2Q99805 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.53□□□□□ -0.08
TM9SF2Q99805 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms