Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 AC106730.1-201ENST00000566722 1090 ntBASIC13.23□□□□□ -0.29
CLCC1Q96S66 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 REXO1L1P-201ENST00000379010 6598 ntBASIC13.23□□□□□ -0.29
CLCC1Q96S66 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 AC005912.2-201ENST00000619492 2400 ntBASIC13.23□□□□□ -0.29
CLCC1Q96S66 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 CICP23-201ENST00000605013 2741 ntBASIC13.23□□□□□ -0.29
CLCC1Q96S66 AC010327.5-201ENST00000586923 3061 ntBASIC13.23□□□□□ -0.29
CLCC1Q96S66 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 U82695.1-201ENST00000635752 1889 ntBASIC13.23□□□□□ -0.29
CLCC1Q96S66 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLCC1Q96S66 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CLCC1Q96S66 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 RHOQP3-201ENST00000437982 621 ntBASIC13.22□□□□□ -0.29
CLCC1Q96S66 KRT18P3-201ENST00000451602 1288 ntBASIC13.22□□□□□ -0.29
CLCC1Q96S66 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 KRT19P2-202ENST00000557173 1012 ntBASIC13.22□□□□□ -0.29
CLCC1Q96S66 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CLCC1Q96S66 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLCC1Q96S66 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms