Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 AL365203.3-201ENST00000609742 2057 ntBASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 FAM197Y7-201ENST00000432892 766 ntBASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 MIR3615-201ENST00000581999 87 ntBASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 AC091271.1-201ENST00000611877 1162 ntBASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 AL138799.1-201ENST00000448213 1675 ntBASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 AL138709.1-201ENST00000614840 1693 ntBASIC17.62■□□□□ 0.41
SYNGAP1Q96PV0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 AC006033.1-201ENST00000440505 426 ntBASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 AC138951.2-201ENST00000623455 1161 ntBASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 AC132938.4-201ENST00000623835 848 ntBASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 AL139099.5-201ENST00000635274 300 ntBASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 AC008894.3-201ENST00000624324 3103 ntBASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 AC112504.1-201ENST00000623415 1841 ntBASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SYNGAP1Q96PV0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 KRT8P35-201ENST00000483942 1338 ntBASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 ZNF767P-206ENST00000513792 565 ntBASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AC078819.1-201ENST00000547454 765 ntBASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AC012085.1-201ENST00000548270 765 ntBASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 C2orf69P2-201ENST00000562032 1123 ntBASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 AC145423.3-201ENST00000615987 467 ntBASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SYNGAP1Q96PV0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms