Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC087481.3-201ENST00000602886 1894 ntBASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AC020658.6-201ENST00000623564 1870 ntBASIC16.02■□□□□ 0.16
RPRD1AQ96P16 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AC011495.1-201ENST00000498085 584 ntBASIC16.02■□□□□ 0.16
RPRD1AQ96P16 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.02■□□□□ 0.16
RPRD1AQ96P16 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AL359711.2-201ENST00000563105 872 ntBASIC16.02■□□□□ 0.16
RPRD1AQ96P16 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AC025181.2-201ENST00000606994 802 ntBASIC16.02■□□□□ 0.16
RPRD1AQ96P16 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
RPRD1AQ96P16 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 CU639417.3-201ENST00000624240 1404 ntBASIC16.02■□□□□ 0.15
RPRD1AQ96P16 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.02■□□□□ 0.15
RPRD1AQ96P16 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 C1QBPP1-201ENST00000400117 770 ntBASIC16.01■□□□□ 0.15
RPRD1AQ96P16 COX5BP8-201ENST00000416911 349 ntBASIC16.01■□□□□ 0.15
RPRD1AQ96P16 NME2P1-201ENST00000426182 414 ntBASIC16.01■□□□□ 0.15
RPRD1AQ96P16 AC005034.1-201ENST00000426657 489 ntBASIC16.01■□□□□ 0.15
RPRD1AQ96P16 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 AC120045.2-201ENST00000567334 178 ntBASIC16.01■□□□□ 0.15
RPRD1AQ96P16 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 AL033527.5-201ENST00000641382 801 ntBASIC16.01■□□□□ 0.15
RPRD1AQ96P16 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RPRD1AQ96P16 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RPRD1AQ96P16 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
RPRD1AQ96P16 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16■□□□□ 0.15
RPRD1AQ96P16 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms