Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PHKG1P2-201ENST00000457537 863 ntBASIC16.12■□□□□ 0.17
IFT43Q96FT9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 AL079307.3-201ENST00000556114 283 ntBASIC16.12■□□□□ 0.17
IFT43Q96FT9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 AL035252.4-201ENST00000624174 288 ntBASIC16.12■□□□□ 0.17
IFT43Q96FT9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
IFT43Q96FT9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IFT43Q96FT9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SPDYE17-201ENST00000412399 783 ntBASIC16.11■□□□□ 0.17
IFT43Q96FT9 AC005034.1-201ENST00000426657 489 ntBASIC16.11■□□□□ 0.17
IFT43Q96FT9 EEF1DP4-201ENST00000446006 880 ntBASIC16.11■□□□□ 0.17
IFT43Q96FT9 GAPDHP21-201ENST00000450301 1010 ntBASIC16.11■□□□□ 0.17
IFT43Q96FT9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 CR383656.12-201ENST00000549567 513 ntBASIC16.11■□□□□ 0.17
IFT43Q96FT9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SPDYE22P-201ENST00000582158 798 ntBASIC16.11■□□□□ 0.17
IFT43Q96FT9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 KRT8P12-202ENST00000472924 1397 ntBASIC16.11■□□□□ 0.17
IFT43Q96FT9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IFT43Q96FT9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.11■□□□□ 0.17
IFT43Q96FT9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 FO393414.2-201ENST00000405153 598 ntBASIC16.1■□□□□ 0.17
IFT43Q96FT9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 SPTLC1P1-201ENST00000447199 261 ntBASIC16.1■□□□□ 0.17
IFT43Q96FT9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT43Q96FT9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 BTBD7P1-201ENST00000447253 1453 ntBASIC16.1■□□□□ 0.17
IFT43Q96FT9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT43Q96FT9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
IFT43Q96FT9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT43Q96FT9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms