Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 AC107373.2-201ENST00000607735 490 ntBASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 AC005252.2-201ENST00000624630 1141 ntBASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 MSTO2P-201ENST00000314835 1709 ntBASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP6V0A1Q93050 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AC092933.1-201ENST00000393644 945 ntBASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AC012441.1-201ENST00000446669 685 ntBASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 GAPDHP40-201ENST00000505218 1006 ntBASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AC025181.2-201ENST00000606994 802 ntBASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AC008894.3-201ENST00000624324 3103 ntBASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 AC084364.1-201ENST00000551967 1556 ntBASIC17.36■□□□□ 0.37
ATP6V0A1Q93050 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 ACTBP11-201ENST00000436287 1126 ntBASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 FO681548.1-201ENST00000455617 1132 ntBASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 FTH1P14-201ENST00000482930 551 ntBASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 MIR4525-201ENST00000580000 75 ntBASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 MIR4538-201ENST00000581377 78 ntBASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ATP6V0A1Q93050 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms