Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
MBD3L1Q8WWY6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 GHSR-202ENST00000427970 912 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 FAM185BP-201ENST00000443595 716 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AC012615.1-201ENST00000565797 1299 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AL031432.2-201ENST00000566714 459 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AL928711.1-201ENST00000570165 459 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AC069148.1-201ENST00000608741 768 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AL078644.1-201ENST00000609881 752 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 ACTL9-202ENST00000612068 1252 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 AL645728.2-201ENST00000641974 660 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 CICP11-201ENST00000434745 2827 ntBASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MBD3L1Q8WWY6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AP000845.1-201ENST00000581677 2131 ntBASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 KRT18P57-201ENST00000443599 1254 ntBASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AC104076.2-201ENST00000448912 469 ntBASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 PHKG1P2-201ENST00000457537 863 ntBASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AC138894.3-201ENST00000603787 634 ntBASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AC008667.4-201ENST00000607370 168 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms