Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 AC091804.1-201ENST00000486888 567 ntBASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 ENPP7P14-201ENST00000621765 1040 ntBASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCNB3Q8WWL7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 AC007787.1-201ENST00000588095 1583 ntBASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 AC018735.1-201ENST00000437208 1502 ntBASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 HSPB1P2-201ENST00000448722 546 ntBASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 AL645728.2-202ENST00000641679 227 ntBASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNB3Q8WWL7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 LRRC59-203ENST00000576448 1531 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 BID-213ENST00000615414 2236 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 TPM3P8-201ENST00000330554 643 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 AL645937.2-201ENST00000396808 931 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 AC104457.1-201ENST00000401024 814 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 EIF3FP3-201ENST00000434851 1086 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 AC004898.1-201ENST00000451057 766 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 AL158070.2-201ENST00000623713 1621 ntBASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCNB3Q8WWL7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
CCNB3Q8WWL7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms