Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AL645937.2-201ENST00000396808 931 ntBASIC14.39□□□□□ -0.11
CT55Q8WUE5 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AP006547.1-201ENST00000563435 692 ntBASIC14.39□□□□□ -0.11
CT55Q8WUE5 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.39□□□□□ -0.11
CT55Q8WUE5 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AL008638.5-201ENST00000623814 1298 ntBASIC14.39□□□□□ -0.11
CT55Q8WUE5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 AC068587.10-201ENST00000641210 219 ntBASIC14.39□□□□□ -0.11
CT55Q8WUE5 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CT55Q8WUE5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.39□□□□□ -0.11
CT55Q8WUE5 PRORSD1P-202ENST00000563365 2154 ntBASIC14.39□□□□□ -0.11
CT55Q8WUE5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AC015818.8-201ENST00000587907 1519 ntBASIC14.38□□□□□ -0.11
CT55Q8WUE5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 CNN2P10-201ENST00000443067 918 ntBASIC14.38□□□□□ -0.11
CT55Q8WUE5 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 RPSAP36-202ENST00000494591 1261 ntBASIC14.38□□□□□ -0.11
CT55Q8WUE5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 KRT8P14-201ENST00000414254 1442 ntBASIC14.38□□□□□ -0.11
CT55Q8WUE5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CT55Q8WUE5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CT55Q8WUE5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.37□□□□□ -0.11
CT55Q8WUE5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CT55Q8WUE5 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CT55Q8WUE5 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms