Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 AC025678.2-201ENST00000562061 970 ntBASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF3IP1Q8TDR0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 AL080243.2-201ENST00000418783 582 ntBASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 AC125807.1-201ENST00000483097 614 ntBASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 AC109322.1-201ENST00000524499 1264 ntBASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 Z92544.3-201ENST00000624747 417 ntBASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF3IP1Q8TDR0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAF3IP1Q8TDR0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF3IP1Q8TDR0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms