Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 DBET-201ENST00000630918 3363 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 TOMM22P5-201ENST00000416399 439 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC098850.1-201ENST00000419919 790 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC092384.3-202ENST00000564646 2873 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC092850.2-201ENST00000623821 2697 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC138969.3-201ENST00000546612 1459 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC138932.2-201ENST00000548268 1459 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 AC126755.4-201ENST00000549796 1459 ntBASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.06□□□□□ -0.16
FNDC9Q8TBE3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
FNDC9Q8TBE3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms