Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 AC007551.1-201ENST00000457394 519 ntBASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 FTH1P14-201ENST00000482930 551 ntBASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 AP000812.2-201ENST00000538934 718 ntBASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 MIR4538-201ENST00000581377 78 ntBASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHKBP1Q8TBC3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 FO681548.1-201ENST00000455617 1132 ntBASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 AL603832.2-201ENST00000566195 2125 ntBASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 AC107373.2-201ENST00000607735 490 ntBASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.32■□□□□ 0.2
SHKBP1Q8TBC3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHKBP1Q8TBC3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms