Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 OR2R1P-201ENST00000441404 914 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AL354861.1-201ENST00000445213 355 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AC114947.1-202ENST00000514136 344 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 CR383656.3-201ENST00000551315 183 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AL022334.2-201ENST00000610000 484 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AC009145.4-201ENST00000625119 1294 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL22A1Q8NFW1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 GCSHP3-201ENST00000431120 391 ntBASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AL512306.1-201ENST00000432698 848 ntBASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 PLS3-210ENST00000626746 216 ntTSL 4 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AP001184.1-201ENST00000637936 376 ntBASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 AC099398.1-201ENST00000567919 2776 ntBASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL22A1Q8NFW1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 BAK1P1-201ENST00000317045 636 ntBASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 MIR3180-2-201ENST00000581748 88 ntBASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL22A1Q8NFW1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms