Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 AKR7A2P1-201ENST00000460134 915 ntBASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 AC091804.1-201ENST00000486888 567 ntBASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 EEF1DP1-201ENST00000585891 896 ntBASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPOQ8N3V7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 AC015818.8-201ENST00000587907 1519 ntBASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.77■□□□□ 0.11
SYNPOQ8N3V7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 NUS1P3-201ENST00000423502 862 ntBASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 AC007969.1-201ENST00000433675 447 ntBASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 AC114812.1-204ENST00000449669 728 ntBASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 HOMER2P2-201ENST00000451621 847 ntBASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 RHOQP1-201ENST00000555758 579 ntBASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPOQ8N3V7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.75■□□□□ 0.11
SYNPOQ8N3V7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms