Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 ZBED1P1-201ENST00000502364 1930 ntBASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 AC069262.1-201ENST00000539058 672 ntBASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 AL512356.2-201ENST00000546955 174 ntBASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 AC013726.1-201ENST00000563747 2285 ntBASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC83Q8IWF9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 LINC01101-201ENST00000622953 1884 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 MROH4P-201ENST00000431302 1578 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 SLED1-202ENST00000512051 380 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AC025048.3-201ENST00000590609 569 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AC005702.4-201ENST00000618393 416 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 MIR6069-201ENST00000620069 79 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AF228730.6-201ENST00000641497 218 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AL033527.5-202ENST00000641632 1098 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 AC084121.3-201ENST00000641716 218 ntBASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC83Q8IWF9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 AL139400.1-201ENST00000366220 510 ntBASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 RPL5P21-201ENST00000404620 815 ntBASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC83Q8IWF9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms