Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 CEND1P1-201ENST00000451006 455 ntBASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 ME2P1-201ENST00000426028 1970 ntBASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
TMEM53Q6P2H8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.4□□□□□ -0.11
TMEM53Q6P2H8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 ALG1L5P-201ENST00000482043 771 ntBASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 AL135744.1-201ENST00000565098 629 ntBASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 AC010327.4-202ENST00000591484 748 ntBASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 AC026120.1-201ENST00000611536 926 ntBASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM53Q6P2H8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms