Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 AC093520.2-201ENST00000561830 333 ntBASIC14.55□□□□□ -0.08
REEP3Q6NUK4 MIR4469-201ENST00000583919 79 ntBASIC14.55□□□□□ -0.08
REEP3Q6NUK4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.55□□□□□ -0.08
REEP3Q6NUK4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 CICP11-201ENST00000434745 2827 ntBASIC14.55□□□□□ -0.08
REEP3Q6NUK4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
REEP3Q6NUK4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 GPS2P2-201ENST00000430745 888 ntBASIC14.54□□□□□ -0.08
REEP3Q6NUK4 MTND6P24-201ENST00000440466 518 ntBASIC14.54□□□□□ -0.08
REEP3Q6NUK4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AP000344.2-201ENST00000512987 629 ntBASIC14.54□□□□□ -0.08
REEP3Q6NUK4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AC026150.2-201ENST00000564693 1156 ntBASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.54□□□□□ -0.08
REEP3Q6NUK4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AL390755.1-201ENST00000623716 2027 ntBASIC14.54□□□□□ -0.08
REEP3Q6NUK4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AC097376.2-205ENST00000610159 5334 ntBASIC14.54□□□□□ -0.08
REEP3Q6NUK4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
REEP3Q6NUK4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.53□□□□□ -0.08
REEP3Q6NUK4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms