Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 KRT18P43-201ENST00000469825 1281 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 DUX4L27-201ENST00000554796 1261 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 AC138969.3-201ENST00000546612 1459 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 AC138932.2-201ENST00000548268 1459 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 AC126755.4-201ENST00000549796 1459 ntBASIC18.62■□□□□ 0.57
RNF20Q5VTR2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF20Q5VTR2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 BTBD7P1-201ENST00000447253 1453 ntBASIC18.61■□□□□ 0.57
RNF20Q5VTR2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF20Q5VTR2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 TIMM17BP1-201ENST00000545713 516 ntBASIC18.6■□□□□ 0.57
RNF20Q5VTR2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 GPALPP1-207ENST00000611650 899 ntBASIC18.6■□□□□ 0.57
RNF20Q5VTR2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF20Q5VTR2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms