Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 TCAF2P1-201ENST00000291129 2421 ntBASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 GHSR-202ENST00000427970 912 ntBASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 AC036164.1-201ENST00000570544 333 ntBASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 RN7SL204P-201ENST00000582831 262 ntBASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PTPN20Q4JDL3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 RN7SL399P-201ENST00000471648 279 ntBASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 FAM86LP-201ENST00000478302 853 ntBASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 AC093004.1-201ENST00000508850 424 ntBASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 MROH4P-201ENST00000431302 1578 ntBASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN20Q4JDL3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN20Q4JDL3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
PTPN20Q4JDL3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN20Q4JDL3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.33■□□□□ 0.21
PTPN20Q4JDL3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN20Q4JDL3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 AC236430.1-201ENST00000402231 743 ntBASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN20Q4JDL3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms