Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.34□□□□□ -0.11
EXT1Q16394 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 AL645937.2-201ENST00000396808 931 ntBASIC14.34□□□□□ -0.11
EXT1Q16394 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.34□□□□□ -0.11
EXT1Q16394 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EXT1Q16394 AC104989.1-201ENST00000519711 778 ntBASIC14.34□□□□□ -0.11
EXT1Q16394 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EXT1Q16394 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.34□□□□□ -0.11
EXT1Q16394 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.34□□□□□ -0.11
EXT1Q16394 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.34□□□□□ -0.11
EXT1Q16394 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 AC133552.6-201ENST00000613406 534 ntBASIC14.34□□□□□ -0.11
EXT1Q16394 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EXT1Q16394 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.34□□□□□ -0.11
EXT1Q16394 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EXT1Q16394 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
EXT1Q16394 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.34□□□□□ -0.11
EXT1Q16394 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EXT1Q16394 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EXT1Q16394 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.33□□□□□ -0.11
EXT1Q16394 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.33□□□□□ -0.11
EXT1Q16394 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EXT1Q16394 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EXT1Q16394 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EXT1Q16394 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
EXT1Q16394 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EXT1Q16394 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
EXT1Q16394 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.33□□□□□ -0.11
EXT1Q16394 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
EXT1Q16394 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.33□□□□□ -0.12
EXT1Q16394 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
EXT1Q16394 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.33□□□□□ -0.12
EXT1Q16394 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.33□□□□□ -0.12
EXT1Q16394 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.33□□□□□ -0.12
EXT1Q16394 MIR1909-201ENST00000411312 80 ntBASIC14.33□□□□□ -0.12
EXT1Q16394 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.33□□□□□ -0.12
EXT1Q16394 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
EXT1Q16394 CROCCP4-201ENST00000457096 498 ntBASIC14.33□□□□□ -0.12
EXT1Q16394 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.33□□□□□ -0.12
EXT1Q16394 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.33□□□□□ -0.12
EXT1Q16394 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.33□□□□□ -0.12
EXT1Q16394 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
EXT1Q16394 AL365203.3-201ENST00000609742 2057 ntBASIC14.33□□□□□ -0.12
EXT1Q16394 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.33□□□□□ -0.12
EXT1Q16394 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.33□□□□□ -0.12
EXT1Q16394 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.33□□□□□ -0.12
EXT1Q16394 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EXT1Q16394 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 AL162727.3-201ENST00000635661 2787 ntBASIC14.33□□□□□ -0.12
EXT1Q16394 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EXT1Q16394 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EXT1Q16394 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
EXT1Q16394 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EXT1Q16394 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EXT1Q16394 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EXT1Q16394 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EXT1Q16394 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms