Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP1Q04837 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP1Q04837 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SSBP1Q04837 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.2□□□□□ -0.3
SSBP1Q04837 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.2□□□□□ -0.3
SSBP1Q04837 TPT1P11-201ENST00000458482 498 ntBASIC13.2□□□□□ -0.3
SSBP1Q04837 AC073648.2-201ENST00000510116 352 ntBASIC13.2□□□□□ -0.3
SSBP1Q04837 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP1Q04837 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP1Q04837 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP1Q04837 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.2□□□□□ -0.3
SSBP1Q04837 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 AP000845.1-201ENST00000581677 2131 ntBASIC13.2□□□□□ -0.3
SSBP1Q04837 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.2□□□□□ -0.3
SSBP1Q04837 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP1Q04837 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP1Q04837 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP1Q04837 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.2□□□□□ -0.3
SSBP1Q04837 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 CICP11-201ENST00000434745 2827 ntBASIC13.2□□□□□ -0.3
SSBP1Q04837 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSBP1Q04837 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
SSBP1Q04837 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP1Q04837 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 AC138969.3-201ENST00000546612 1459 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 AC138932.2-201ENST00000548268 1459 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 AC126755.4-201ENST00000549796 1459 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 AC012508.2-201ENST00000567613 1472 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP1Q04837 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 AL139010.1-201ENST00000454878 894 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 AC105233.2-201ENST00000523697 349 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP1Q04837 AF228730.5-201ENST00000530288 346 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.19□□□□□ -0.3
SSBP1Q04837 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.19□□□□□ -0.3
SSBP1Q04837 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms